Python in Neuroscience satellite to Euroscipy

›9:15 (15min)

Welcome

› Dussane

9:15 - 9:30 (15min)

Welcome

Dussane

›9:30 (1h30)

neural simulation
Andrew Davison

› Dussane

9:30 - 11:00 (1h30)

neural simulation

Dussane

Andrew Davison

› What's new with Brian? - Romain Brette, Laboratoire de la Psychologie de la Perception, Département d'Etudes Cognitives 09:30-10:00 (30min)

› PyNN: a unified interface for neuronal network simulators - Andrew Davison, Unité de Neuroscience, Information et Complexité 10:00-10:15 (15min)

› Python Tools for Neuromorphic Systems Configuration - Emre Neftci, Institute of Neuroinformatics 10:15-10:30 (15min)

› CLONES: A Closed-Loop Simulation Framework for Body, Muscles and Neurons - Thomas Voegtlin, Laboratoire Lorrain de Recherche en Informatique et Automatique 10:30-10:45 (15min)

› DANA - Nicolas P. Rougier, INRIA Nancy Grand Est, Laboratoire Lorrain de Recherche en Informatique et Automatique 10:45-11:00 (15min)

›11:00 (30min)

Coffee break

11:00 - 11:30 (30min)

Coffee break

›11:30 (1h)

electrophysiology
Romain Brette

› Dussane

11:30 - 12:30 (1h)

electrophysiology

Dussane

Romain Brette

› Flexible spike sorting in Python - Bartosz Telenczuk, Institute for Theoretical Biology, Neurology - Belevtsoff Dmytro, Bernstein Center for Computational Neuroscience Berlin, Neurology 11:30-11:45 (15min)

› NeurOnline: A software to perform online analysis and control of electrophysiological recordings - Ambard Maxime, Bernstein Center Freiburg 11:45-12:00 (15min)

› Using Python tools for analysis of a mathematical model of after-depolarisation - Jakub Nowacki, Bristol Centre for Applied Nonlinear Mathematics 12:00-12:15 (15min)

› Optimisation of stimulation patterns for specific questions in electrophysiology experiments: a Python framework - Damien Drix, Centre for Computational Neuroscience and Robotics 12:15-12:30 (15min)

›12:30 (1h30)

Lunch

12:30 - 14:00 (1h30)

Lunch

›14:00 (1h30)

neuroimaging data processing
Bertrand Thirion

› Dussane

14:00 - 15:30 (1h30)

neuroimaging data processing

Dussane

Bertrand Thirion

› The virtues and sins of PyMVPA - Yaroslav O. Halchenko, Dr. James V. Haxby Lab 14:00-14:30 (30min)

› Classification, Induction and Brain Decoding - Emanuele Olivetti, NeuroInformatics Laboratory - Susanne Greiner, NeuroInformatics Laboratory 14:30-14:45 (15min)

› BrainVISA: a complete software platform for neuroimaging - Dominique Geffroy, IFR 49 - Yann Cointepas, LNAO, NeuroSpin, CEA 14:45-15:00 (15min)

› Pyhrf: a package to extract and study hemodynamics from fMRI data - Thomas VINCENT, Laboratoire de Neuro-imagerie Assistée par Ordinateur 15:00-15:15 (15min)

›15:15 (15min)

Coffee break

15:15 - 15:30 (15min)

Coffee break

›15:30 (1h30)

Poster

15:30 - 17:00 (1h30)

Poster

› 3D Brain Atlas Reconstructor and Common Atlas Format, the infrastructure for constructing tree dimensional brain atlases - Piotr Majka, Departament of Neurophysiology, Nencki Institute of Experimental Biology 15:30-17:00 (1h30)

› A Package for Kernel Smoothing via Diffusion: Rate Estimation of Spike Trains modeled as Non-homogeneous Poisson Processes. - Taskin Deniz, Bernstein Center Freiburg 15:30-17:00 (1h30)

› Developing and evaluating a computerized tool for measuring perceived stress - Dalal Ben Loubir, Medical Informatics Laboratory - Mohamed Bennani Othmani, Medical Informatics Laboratory 15:30-17:00 (1h30)

› Dynamical characterisation of neural networks and neurophysiological time series: Parallel approaches using Python - Thomas Greg Corcoran,, Centre for Computational Neuroscience and Robotics, University of Sussex 15:30-17:00 (1h30)

› Gom2n: A toolchain to simulate and investigate selective stimulation strategies for FES - Laforet Jeremy, Biomecanique et BioIngenierie 15:30-17:00 (1h30)

› Machine learning for fMRI in Python: inverse inference with scikit-learn - Bertrand Thirion, INRIA Saclay-Île-de-France 15:30-17:00 (1h30)

› Random Subspace Methods for Neuroimaging - Diego Sona, NeuroInformatics Laboratory - Paolo Avesani, NeuroInformatics Laboratory 15:30-17:00 (1h30)

› Simulating topographic distributions of event-related potentials using Brisk - Roman Goj, Psychological Imaging Laboratory 15:30-17:00 (1h30)

› Waxholm Space - Raphael Ritz, Secretariat 15:30-17:00 (1h30)